Commission

Since its constitution in 2004, the Beilstein-Institut has supported the STRENDA Commission, an international panel of experts from diverse fields including biochemistry, bioinformatics, and theoretical biology. The Commission is dedicated to improving the reporting and standardization of data in enzymology and biocatalysis. To achieve this, our work is organized into dedicated working groups, where members focus on specific topics before presenting their findings to the full STRENDA Commission for discussion. These working groups are open to everyone, and we welcome anyone with an interest in our mission to join and contribute their expertise.

Current members

Barbara M. Bakker / University of Groningen, The Netherlands

Andreas Bommarius / Georgia Institute of Technology, Atlanta, USA

Pimchai Chaiyen / VISTEC, Rayong, Thailand

Athel Cornish-Bowden / CNRS-BIP, Marseille, France

Paul F. Fitzpatrick, University of Texas Health Science Center at San Antonio, USA

Peter Halling / University of Strathclyde, Glasgow, Scotland, UK

Antje Jäde / Leibniz Institute DSMZ, Braunschweig, Germany

Thomas S. Leyh / The Albert-Einstein-College, New York, USA

Andrew McDonald / Trinity College Dublin, Ireland

Jürgen Pleiss / University of Stuttgart, Germany

Frank M. Raushel / Texas A&M University, College Station, USA

Johann M. Rohwer / University of Stellenbosch, South Africa

Santiago Schnell / Dartmouth College, Hanover, USA

Hans V. Westerhoff / Universities of Amsterdam, The Netherlands

Ulrike Wittig / Heidelberg Institute for Theoretical Studies, Germany

Roland Wohlgemuth / Lodz University of Technology, Poland

Carsten Kettner (co-ordination) / Beilstein-Institut, Germany

Past members

Rolf Apweiler / EMBL Outstation, European Bioinformatics Institute, Hinxton, UK

Richard N. Armstrong † / Vanderbilt University, Nashville, USA

Antonio Baici / University of Zurich, Switzerland

Amos Bairoch / Swiss Institute of Bioinformatics, Geneva, Switzerland

Jan-Hendrik Hofmeyr / University of Stellenbosch, South Africa

Meina Neumann-Schaal / Leibniz Institute DSMZ, Braunschweig, Germany

Claire O'Donovan / EMBL Outstation, European Bioinformatics Institute, Hinxton, UK

Dietmar Schomburg / Technical University Braunschweig, Germany

Christoph Steinbeck, EMBL Outstation, European Bioinformatics Institute, UK

Neil Swainston / University of Liverpool, UK

Keith Tipton / Trinity College, Dublin, Irland

Ming-Daw Tsai / Academia Sinica, Taipei, Taiwan

Working Groups

STRENDA Guidelines

Revision of the STRENDA Guidelines for Enzyme Kinetics and Assay Conditions

Lead: Carsten Kettner

Members: Andreas Bommarius

 

STRENDA DB

Conceptual development of STRENDA DB which also includes feature requests, the development of specifications and tests of the implemented features

Lead: Carsten Kettner

Members: Frank Raushel, Johann Rohwer, Andreas Bommariuis

 

STRENDA Biocatalysis Guidelines

Further development of the metadata catalogue, revision of the guidelines, development of a data model, development of software to ease the adoption of the guidelines by journals

Lead: Katrin Rosenthal, Dörte Rother

Members: Jürgen Pleiss, Roland Wohlgemuth, Peter Halling, Carsten Kettner, Andreas Bommarius

 

EnzymeML

Extensions of EnzymeML, definition of use cases and adoption of EnzymeML, software tools for the automated data acquisition

Lead: Jürgen Pleiss

Members: Katrin Rosenthal, Dörte Rother, Andreas Bommarius, Johann Rohwer, Santiago Schnell, Carsten Kettner

 

Thermodynamics

Development of guidelines and concepts, proposal of a biochemical standard, collection and calculation of chemical and metabolic potentials of biochemicals, software tool for an online retrieval of potential data

Lead: Hans Westerhoff

Members: Peter Halling, Johann Rohwer, Roland Wohlgemuth, Carsten Kettner

 

Enzyme Networks

Description of enzyme cascades and synthetic pathways

Lead: Hans Westerhoff

Members: Johann Rohwer, Roland Wohlgemuth

 

Outreach

Creation of promotional materials, establishing collaborations, networking, e.g. RDMkit, flyers, promotional slide, online course and training materials

Lead: Ulrike Wittig

Members: Carsten Kettner